Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899519.1_cds_XP_016449521.1_44059
CDS Infomation

[gene=LOC107774488] [db_xref=GeneID:107774488] [protein=UPF0051 protein ABCI8, chloroplastic-like] [protein_id=XP_016449521.1] [location=complement(join(1561..1779,3037..4458))] [gbkey=CDS]
Sequence

ATGGCTTCTCTTGTTACCAATGGAATCTCCTGTTTTTCTCCTCAACAAATCACTGAACAA
CCTAAACTACCAAAAGGGTGTCAATTTCTTCAAAAATCAGCTGCACCCAGAAACCCTAAT
TCAAGAAATTTGAAGGTCAAAGCTGCAGAATTGGCCAACACCACTCTTGACACCCCAGGT
AAAGATTCCTCCTTTTCAACAAATGAAATTGACCCACTTCAGAAATTCTTGAAAAGAGAC
TATAAATGGGGTTTTAATGAAAAAATTGAATCTTTTGCACTACCAAAAGGGCTTTCTGAG
GAAACTGTAAAGCTGATTTCTGCAAAGAAAAATGAGCCTAGTTGGATGCTTGAGTTCAGG
TTGAAAGCTTATGAGAAATTTATTAAAATGAAAGAGCCTAATTGGTCTGATAATAGGTAT
CCAGAAATTAATTTTCAAGATATTGTTTATTATTCAGAACCTAAAAAGAAACCAACTTTA
AATAGTCTTGATGAAGCTGACCCTGAGCTTATTAAGTATTTTGATAAATTGGGTGTGCCT
TTAAACGAAAGGAATCGTTTGGCGAATGTGGCGGTTGATGCTGTTCTTGATAGTGTTTCT
ATTGCTACTACACATAGGAAGACTTTAGAGAAAGCTGGTGTGATTTTTTGTTCGATATCT
GAGGCGATTAGGGAGTATCCGGATTTAGTTAAGAAGTATTTGGGGAGAGTTGTGCCCCCG
GAAGACAACTTTTACGCAGCTCTGAATTCGGCTGTGTTTAGTGATGGATCATTTGTGTAT
ATACCCAAGAACACTAGGTGTCCGATGCAGATATCGACTTATTTTAGAATAAATGCTATG
GAAACAGGACAGTTTGAGAGGACTGTTATAATTGCAGAGGAAGGGAGTTTTGTAGAGTAT
TTAGAAGGGTGTACCGCGCCTGCATATGATACTAATCAGTTACATGCTGCTGTGGTGGAG
TTGTATTGTGATGAAGGTGCGGAGATTAAGTATTCCACTGTGCAGAATTGGTATGCGGGA
GATGAGGAAGGTAAAGGAGGTATTTATAATTTTGTTACAAAGAGGGGACTTTGCGCTGGA
GCTAGGTCGAAGATTTCGTGGACACAAGTGGAGACAGGGTCAGCTATTACATGGAAATAT
CCGAGTGTTTTGTTAGAAGGTGATGAATCAGTAGGTGAATTCTATTCTGTGGCGTTGACT
AATAATTATCAGCAGGCAGATACAGGGACAAAGATGATACACAAAGGGAAGAATACGAGG
AGTAGGATAATTTCAAAGGGTATTTCAGCGGGACATTCTAGGAACTGTTATCGAGGACTA
GTTCAGGTGTTGTCAAATGCAGAAAATGCCAAGAACTCCTCGCAGTGTGATTCAATGCTC
ATTGGTGATACTGCCGCCGCCAACACTTATCCATACATTCAGAGCAAAAACCCAACTGCT
CGGATCGAACACGAAGCTACCACTTCAAAGATTGGTGAAGATCAGTTGTTTTATTTCCAA
CAGAGGGGGATCGACTATGAAAAAGCGATGGCTGCGATGATTTCGGGGTTTTGTAGGGAC
GTTTTCAATGAACTTCCTGATGAATTTGGTGCTGAGGTGAATCAACTAATGAGCTTGAAA
CTTGAAGGATCTGTTGGTTAA

Peptide Sequence

PEP ID

XP_016449521.1
PEP Infomation

PREDICTED: UPF0051 protein ABCI8, chloroplastic-like [Nicotiana tabacum]
Sequence

MASLVTNGISCFSPQQITEQPKLPKGCQFLQKSAAPRNPNSRNLKVKAAELANTTLDTPG
KDSSFSTNEIDPLQKFLKRDYKWGFNEKIESFALPKGLSEETVKLISAKKNEPSWMLEFR
LKAYEKFIKMKEPNWSDNRYPEINFQDIVYYSEPKKKPTLNSLDEADPELIKYFDKLGVP
LNERNRLANVAVDAVLDSVSIATTHRKTLEKAGVIFCSISEAIREYPDLVKKYLGRVVPP
EDNFYAALNSAVFSDGSFVYIPKNTRCPMQISTYFRINAMETGQFERTVIIAEEGSFVEY
LEGCTAPAYDTNQLHAAVVELYCDEGAEIKYSTVQNWYAGDEEGKGGIYNFVTKRGLCAG
ARSKISWTQVETGSAITWKYPSVLLEGDESVGEFYSVALTNNYQQADTGTKMIHKGKNTR
SRIISKGISAGHSRNCYRGLVQVLSNAENAKNSSQCDSMLIGDTAAANTYPYIQSKNPTA
RIEHEATTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLK
LEGSVG

Transcript Sequence

Gene sequence data has not been registered.